FredHutch/docker-virfinder

Name: docker-virfinder

Owner: Fred Hutchinson Cancer Research Center

Description: Docker image running VirFinder

Created: 2018-05-14 19:32:44.0

Updated: 2018-05-14 20:16:44.0

Pushed: 2018-05-14 20:16:42.0

Homepage: null

Size: 4092

Language: R

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README

Docker image running VirFinder

VirFinder is a method for finding viral contigs from de novo assemblies.

Ren, et al. 2017 “VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data” Microbiome

Usage:

Rscript run_virfinder.Rscript