FredHutch/docker-sra

Name: docker-sra

Owner: Fred Hutchinson Cancer Research Center

Description: Get data from SRA

Created: 2018-04-09 17:40:34.0

Updated: 2018-05-03 19:27:32.0

Pushed: 2018-05-03 19:35:17.0

Homepage: null

Size: 35

Language: Python

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README

docker-sra

Get data from SRA

Docker Repository on Quay

Usage:

sra.py 
--accession <SRA ACCESSION>
--output-folder <OUTPUT FOLDER>

Output folder supports S3 buckets.


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.