wtsi-hgi/capmq

Name: capmq

Owner: Wellcome Trust Sanger Institute - Human Genetics Informatics

Description: Simple program to cap mapping quality in a given alignment file

Forked from: mcshane/capmq

Created: 2017-09-07 10:03:17.0

Updated: 2017-09-07 10:03:18.0

Pushed: 2017-09-08 11:23:52.0

Homepage: null

Size: 39

Language: C

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README

capmq

Simple program to cap mapping quality in a given alignment file. Uses htslib for SAM/BAM/CRAM reading and writing.

clone git://github.com/mcshane/capmq.git
apmq
 HTSDIR=/path/to/your/htslib/install/or/build/dir
 test

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.