Bionano Genomics

Login: bionanogenomics

Company: null

Location: San Diego

email: dev@bionanogenomics.com

Blog: http://www.bionanogenomics.com

Repositories

AccessImportUtils
Scripts to compress assembly or hybrid scaffold output for importing into Bionano Access or IrysView
ClusterArguments
Running the assembly command-line on a cluster requires a properly configured clusterArgument.xml file (-C parameter). Users need to configure the clusterArguments_custom.xml for their own cluster.
cmap2fa
Tool for Transforming CMAP to FASTA Format
File-Format-Specification-Sheets
Specifications for Bionano Genomic proprietary file formats
JBrowsePlugin
JBrowse plugin to support BioNano Genomics files
smap2vcf
Tool for Transforming SMAP to VCF Format
svmerge2vcf
Tool for Transforming SVMerge to VCF Format

This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.