ICGC DCC

Login: icgc-dcc

Company: null

Location: Toronto, ON, Canada

email:

Blog: http://dcc.icgc.org

Members

  1. Aly
  2. Andy Yang
  3. Anthony Cros
  4. Bob Tiernay
  5. Christine
  6. Denis Yuen
  7. Du?an Andri?
  8. Francois G.
  9. Junjun Zhang
  10. Michael Moncada
  11. Shane Wilson
  12. Sid Joshi
  13. Vincent Ferretti

Repositories

collab-to-aws-transfer-jt
null
Daco-Py
Simple Python Wrapper for DACO
dcc-cm
Configuration management and related automation
dcc-common
Common modules for code reuse
dcc-config
Configuration server for DCC projects
dcc-dev
Data portal development server
dcc-docs
User facing documentation for ICGC DCC at http://docs.icgc.org/
dcc-download
Modules that allow the creation, download and maintenance of large portal data sets
dcc-downloader
Modules that allow the creation, access and maintenance of large portal data sets
dcc-etl
ETL modules that transform project submissions into portal data products
dcc-ga4gh
null
dcc-id
ID system for ICGC projects
dcc-import
Reference data importers
dcc-iobio
ICGC customized iobio containers for accessing ICGC cloud based files
dcc-metadata
Metadata subsystem for registration and lookup in cloud based environments
dcc-parent
Common parent pom for module configuration reuse
dcc-portal
Data portal for exploring and accessing data
dcc-release
Second generation of the ICGC DCC release ETL built on Spark
dcc-repository
Importer for the ICGC "Data Repository" feature which imports file metadata from various external data repositories.
dcc-submission
Modules for accepting and validating project submissions
ega-file-transfer
null
ega-file-transfer-to-collab-1-jtracker
Mirror of our internal git repo: http://142.1.177.124/jt-hub/ega-file-transfer-to-collab-jtracker
ega-file-transfer-to-collab-2-jtracker
null
ega-file-transfer-to-collab-3-jtracker
null
ega-file-transfer-to-collab-4-jtracker
null
ega-file-transfer-to-collab-5-jtracker
null
ega-file-transfer-to-collab-jt
JTracker workflow to transfer ICGC sequencing data from EGA to Cancer Genome Collaboratory
ega_script
null
egasub
EGASub - ICGC EGA Submission CLI
es-loader
Tool for initializing Elasticsearch indexes and loading data
icgconnect
null
icgc-python
Python API for accessing ICGC Data
jtracker
JTracker ? A 'track everything' solution for workflow authoring, sharing and execution.
Jukebox
:construction: Customizations for JupyterHub and Jupyter notebooks.
pcawg-import
Download and Transform PCAWG data into ICGC format.
pcawg-rna-seq-ega-submission
null
pcawg-rna-seq-to-ega-submit-jt
null
This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.