tranSMART Foundation

Login: tranSMART-Foundation

Company: null

Location: null

email: contact@transmartfoundation.org

Blog: http://www.transmartfoundation.org

Members

  1. Florian Guitton

Repositories

abondoned-transmart-docker
A docker image for the tranSMART Foundation's transmartApp
blend4j-plugin
blend4j-plugin is a grails plugin to access galaxy.
dalliance-plugin
null
folder-management-plugin
The transmart (and grails) plugin that contains the folder-management elements.
GWAVA
Genome Wide Association Study Visualizer (from Pfizer)
IpaApi
null
library-structure
null
mydas
mydas is an easy-to-extend Java DAS server framework.
RInterface
A R module with packaged functions to query the tranSMART database directly
Rmodules
A R statistical analysis module plugin for tranSMART
Scripts
A collection of scripts for managing all the tranSMART Foundation repositories
SmartR
SmartR
transmartApp
tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their analytical results in the context of published literature and other work.
transmartApp-doc
null
transmart-batch
tranSMART pipeline alternative to ETL, using Spring Batch
transmart-core
Core components and documentation of the tranSMART platform.
transmart-core-api
null
transmart-core-db
TranSMART Core
transmart-data
Tools for managing tranSMART's database
transmart-docker
All in one test platform deployment for tranSMART through Docker
tranSMART-ETL
tranSMART ETL pipelines and configurations
transmart-extensions
Elements that are being collected for refactoring but do not yet have a home. This project needs to be reviewed often!
transmart-gwas-plink
Plink integration for tranSMART
transmart-gwas-plugin
The transmart (and grails) plugin that contains the GWAS elements.
transmart-ICE
ICE tool for transmart ETL (formerly FCL4tranSMART)
transmart-legacy-db
Contains the Grails domain declarations of the legacy transmart schema
transmart-metacore-plugin
The tranSMART plugin Metacore
transmart-mydas
null
transmart-rest-api
HTTP available tranSMART RESTful API
transmart-test
Functional tests for tranSMART
transmart-xnat-importer-plugin
null
transmart-xnat-viewer
Connector to link tranSMART to an XNAT server
This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.