CD2H GitHub Repositories

These are repositories flagged with "data2health" as a topic. (switch to organization view)

Repository Count: 52

vivo-isf-ontology (openrif)

The "VIVO-ISF Ontology" is an OWL2 representation of the VIVO-ISF Data Standard

contributor-role-ontology (data2health)

This ontology provides contribution roles for use in crediting persons or organizations.

data-harmonization (data2health)

Supporting multi-center research requires combining data created in different data models; this community coordination project aims to provide an data model adaptor for CTSA hubs.

hot-fhir-projects (data2health)

Overarching repo for hot-fhir projects.

DREAM-Challenge (data2health)

EHR DREAM Challenge

architecting_attribution (data2health)

This project aims to provide a mechanism to track and provide attribution.

reusable-data-best-practices (data2health)

A collaborative guidebook for reusable data best practices

tools-cloud-infrastructure (data2health)

CD2H Tools and Cloud Infrastructure Core

CTS-Personas (data2health)

Translational workforce roles and persona profiles

roadmap (data2health)

Start here to explore the projects and repositories of the Center for Data to Health

leaf-edw (data2health)

Open Source Clinical Enterprise Data Warehouse (EDW) Data Browser (Leaf)

InvenioRDM (data2health)

InvenioRDM: an interdisciplinary open research repository

credit-ontology (data2health)

An OWL implementation of CRediT; a high-level classification of the diverse roles performed in the work leading to a published research output in the sciences. Its purpose to provide transparency in contributions to scholarly published work, to enable improved systems of attribution, credit, and accountability.

ehr2HPO.prj (data2health)

Conversion of EHR data (such as LOINC) to HPO codes

clinical-adaptor (data2health)

Use the FHIR Resource model to enhance the existing CDMH infrastructure for the collection of Real World Data (RWD) from EHR for line level STDM data submission to FDA

maturity-model (data2health)

Research Informatics and open science maturity model

admin (data2health)

CD2H Administration Core

repository-and-index-software (data2health)

This is a list of repositories, repository frameworks, and data catalogs. It focuses on technical architecture, how metadata is handled and what standards are used, and what next-generation repository features (if any) are implemented.

informatics-maturity (data2health)

CD2H Informatics Maturity and Best Practices Core

rdp-portal (data2health)

CD2H project: Reusable Data best practice portal

edu-harmonization (data2health)

Educational resource and competency harmonization project

server (HOT-Ecosystem)

Baseline terminology server image for Healthcare Open Terminology FHIR (HOT-FHIR) Server

next-gen-data-sharing (data2health)

CD2H Next Generation Data Sharing and Analytics Core

scits-platform (data2health)

Science of translational science research platform

schemas (data2health)

Hosting CD2H data schemas in schema.org standard

resource-discovery (data2health)

CD2H Resource Discovery Core

Cloud-Tool-Architecture (data2health)

This project is in the Tool & Cloud Infrastructure

competitions (NUARIG)

Competitions is a platform to support robust peer review within and across CTSA hubs. This is a cloud-based, single-sign on application for investigators, reviewers and administrators. With Competitions, you can post opportunities, submit applications and review and score those submissions

data-quality (data2health)

Data Quality Methods and Tools to Support CTSA Hub Data Sharing

BioDataClubKit.github.io (BioDataClubKit)

A co-learning data science meetup initiative

GeoNamesTagLib (data2health)

JSP Tag library providing access to a local cache of GeoNames data

serviceMapper (data2health)

A small utility web application used to capture CTSA hub service descriptions and align them with one or more CD2H service taxonomies.

AMPTagLib (data2health)

Support library for AMP

CD2HTagLib (data2health)

CD2H-specific utility library (primarily for Labs, RPPR, etc.)

CD2H-analytics (data2health)

Labs demonstration app regarding various aspects of CD2H (personnel, current projects, etc.)

project-repo-template (data2health)

template for project repositories

tubeForager (data2health)

Web app supporting curation of YouTube videos for inclusion in the CTSAsearch index.

cd2h-theme (data2health)

WordPress theme for CD2H website; tickets for the website should be in website repo

all-hands (data2health)

annual meetings and other resources

JSONTagLib (eichmann)

A JSP tag library supporting access to various JSON constructs as tags. This is currently targeted at the V4 GitHub API.

cd2h-labs (data2health)

Demonstration web site for the Center for Data to Health and its collaborators

governance-pathways (data2health)

CTSA Data Sharing Governance Pathways Project

website (data2health)

Issues related to the CD2H website (https://ctsa.ncats.nih.gov/cd2h/home)

SPARQLTagLib (eichmann)

A JSP tag library providing functionality roughly equivalent to the JSTL SQL tag set, just for a triple store.

competitions-project (data2health)

Competitions is an open source tool to run NIH-style peer review of competitions, pilot projects, and research proposals in a cloud-based consortium-wide single sign-on platform. To report a bug or submit a feature request please head over the to the code repository at https://github.com/nuarig/competitions/issues

acknowledgments (data2health)

An application supporting search and browsing of the acknowledgment sections of PubMed Central papers.

CD2H-driveTagLib (data2health)

Java library supporting integration access for the CD2H Google Drive hierarchy.

research-outputs-ontology (data2health)

This ontology provides scholarly research outputs, for use in crediting persons or organizations.

mtip-tutorial (data2health)

Managing Translational Informatics Projects Tutorial

FederationTagLib (data2health)

A JSP tag library supporting the Direct2Experts API.

geonames (data2health)

Application scaffold for GeoNames data

SPARQLTagLib (data2health)

A JSP tag library providing functionality roughly equivalent to the JSTL SQL tag set, just for a triple store.


This work is supported by the National Institutes of Health's National Center for Advancing Translational Sciences, Grant Number U24TR002306. This work is solely the responsibility of the creators and does not necessarily represent the official views of the National Institutes of Health.